PRIMER_SEQUENCE_ID=seq0
COMMENT=should fail
PRIMER_MAX_MISPRIMING=18
PRIMER_SELF_ANY=20
PRIMER_SELF_END=20
PRIMER_MAX_TM=100
PRIMER_MIN_TM=10
PRIMER_MIN_SIZE=20
PRIMER_MAX_SIZE=20
PRIMER_MIN_GC=10
PRIMER_MAX_GC=90
SEQUENCE=NACGGGCATGGCGATCGCTGGNNNNNNNNNNNNANNNNNNNNCNNNNNNNNNNNNNGNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNANNNNNNNNCNNNNNNNNTNCNGCTGGCAGTCTAGCGGGCATNANANANANAAN
PRIMER_MISPRIMING_LIBRARY=primer_repeat_long_lib
PRIMER_EXPLAIN_FLAG=1
PRIMER_LEFT_EXPLAIN=considered 49, too many Ns 48, high repeat similarity 1, ok 0
PRIMER_RIGHT_EXPLAIN=considered 49, too many Ns 48, ok 1
PRIMER_PAIR_EXPLAIN=considered 0, ok 0
=
PRIMER_SEQUENCE_ID=seq1
COMMENT=Should find one pair
SEQUENCE=NACGGGCATGGCGATCGCTAANNNNNNNNNNNNANNNNNNNNCNNNNNNNNNNNNNGNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNANNNNNNNNCNNNNNNNNTNCNGCTGGCAGTCTAGCGGGCATNANANANANAAN
PRIMER_LEFT_EXPLAIN=considered 49, too many Ns 48, ok 1
PRIMER_RIGHT_EXPLAIN=considered 49, too many Ns 48, ok 1
PRIMER_PAIR_EXPLAIN=considered 1, ok 1
PRIMER_PAIR_PENALTY=17.1673
PRIMER_LEFT_PENALTY=10.043573
PRIMER_RIGHT_PENALTY=7.123677
PRIMER_LEFT_SEQUENCE=ACGGGCATGGCGATCGCTAA
PRIMER_RIGHT_SEQUENCE=ATGCCCGCTAGACTGCCAGC
PRIMER_LEFT=1,20
PRIMER_RIGHT=135,20
PRIMER_LEFT_TM=70.044
PRIMER_RIGHT_TM=67.124
PRIMER_LEFT_GC_PERCENT=60.000
PRIMER_RIGHT_GC_PERCENT=65.000
PRIMER_LEFT_SELF_ANY=8.00
PRIMER_RIGHT_SELF_ANY=5.00
PRIMER_LEFT_SELF_END=6.00
PRIMER_RIGHT_SELF_END=3.00
PRIMER_LEFT_MISPRIMING_SCORE=15.00, seq1099  * 1.0
PRIMER_RIGHT_MISPRIMING_SCORE=6.00, seq9  * 2.0
PRIMER_PAIR_MISPRIMING_SCORE=20.00, seq1099  * 1.0
PRIMER_LEFT_END_STABILITY=7.5000
PRIMER_RIGHT_END_STABILITY=9.7000
PRIMER_PAIR_COMPL_ANY=7.00
PRIMER_PAIR_COMPL_END=1.00
PRIMER_PRODUCT_SIZE=135
=
